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Publications for: Michael Anthony Murphy
Book Chapter
Murphy, M. A., & Vo, A. (2021). The Multiscale Nature of the Brain and Traumatic Brain Injury. Multiscale Biomechanical Modeling of the Brain. Cambridge, Massachusetts: Academic Press. 1-26. DOI:10.1016/B978-0-12-818144-7.00004-9. [Abstract] [Document Site]
Murphy, M. A., Horstemeyer, M., & Prabhu, R. (2021). Modelling Nanoscale Cellular Structures Using Molecular Dynamics. Multiscale Biomechanical Modeling of the Brain. Cambridge, Massachusetts: Academic Press. 53-76. DOI:10.1016/B978-0-12-818144-7.00001-3. [Abstract] [Document Site]
Bakhtiarydavijani, A., Murphy, M. A., Prabhu, R., Fonville, T. R., & Horstemeyer, M. (2021). A. Bakhtiarydavijani A Macroscale Mechano-physiological Internal State Variable (MPISV) Model for Neuronal Membrane Damage with Subscale Microstructural Effects. Multiscale Biomechanical Modeling of the Brain. Cambridge, Massachusetts: Academic Press. 119-138. DOI:10.1016/B978-0-12-818144-7.00003-7. [Abstract] [Document Site]
Peer-Reviewed Journals
Vo, A., Murphy, M. A., Phan, P. K., Stone, T.W., & Prabhu, R. (2023). Molecular Dynamics Simulation of Membrane Systems in the Context of Traumatic Brain Injury. Current Opinion in Biomedical Engineering. 27, 8. DOI:10.1016/j.cobme.2023.100453. [Document Site]
Vo, A., Murphy, M. A., Phan, P. K., Prabhu, R., & Stone, T.W. (2023). Effect of Force Field Resolution on Membrane Mechanical Response and Mechanoporation Damage under Deformation Simulations. Molecular Biotechnology. 66, 865–8. DOI:10.1007/s12033-023-00726-x. [Document Site]
Vo, A., Murphy, M. A., Stone, T.W., Phan, P. K., Baskes, M. I., & Prabhu, R. (2021). Molecular Dynamics Simulations of Phospholipid Bilayer Mechanoporation under Different Strain States—a Comparison between GROMACS and LAMMPS. Modelling and Simulation in Materials Science and Engineering. 29, 20. DOI:10.1088/1361-651X/abfeaf. [Document Site]
Bakhtiarydavijani, A., Khalid, G., Murphy, M. A., Johnson, K. L., Peterson, L. A., Jones, M., Horstemeyer, M., Dobbins, A. C., & Prabhu, R. (2021). A Mesoscale Finite Element Modelling Approach for Understanding Morphology and Material Heterogeneity Effects in Chronic Traumatic Encephalopathy. Computer Methods in Biomechanics and Biomedical Engineering. 24(11), 1169-1183. DOI:10.1080/10255842.2020.1867851. [Abstract] [Document Site]
Bakhtiarydavijani, A., Murphy, M. A., Mun, S., Jones, M. D., Bammann, D., LaPlaca, M. C., Horstemeyer, M., & Prabhu, R. (2019). Damage Biomechanics for Neuronal Membrane Mechanoporation. Modelling and Simulation in Materials Science and Engineering. 27, 065004. DOI:10.1088/1361-651X/ab1efe. [Abstract]
Prabhu, R., Begonia, M., Whittington, W. R., Murphy, M. A., Mao, Y., Liao, J., Williams, L. N., Horstemeyer, M., & Sheng, J. (2019). Compressive Mechanical Properties of Porcine Brain: Experimentation and Modeling of the Tissue Hydration Effects. Bioengineering. 6(2), 40. DOI:10.3390/bioengineering6020040. [Abstract]
Murphy, M. A., Mun, S., Horstemeyer, M., Baskes, M. I., Bakhtiarydavijani, A., LaPlaca, M. C., Gwaltney, S. R., Williams, L. N., & Prabhu, R. (2018). Molecular Dynamics Simulations Showing 1-Palmitoyl-2-Oleoyl-Phosphatidylcholine (POPC) Membrane Mechanoporation Damage under Different Strain Paths. Journal of Biomolecular Structure & Dynamics. 1-14. DOI:10.1080/07391102.2018.1453376. [Abstract] [Document]
Murphy, M. A., Horstemeyer, M., Gwaltney, S. R., Stone, T.W., LaPlaca, M., Liao, J., Williams, L. N., & Prabhu, R. (2016). Nanomechanics of Phospholipid Bilayer Failure under Strip Biaxial Stretching Using Molecular Dynamics. Modelling and Simulation in Materials Science and Engineering. 24(5), 055008. DOI:10.1088/0965-0393/24/5/055008.
Peer-Reviewed Conference Abstracts
Murphy, M. A., Horstemeyer, M., Gwaltney, S. R., Liao, J., Williams, L. N., & Prabhu, R. (2014). POPC Phospholipid Bilayer Failure Under Strip Biaxial Stretching Using Molecular Dynamics. Biomedical Engineering Society Annual Conference. San Antonio, TX.
Professional Presentations
Murphy, M. A., Mun, S., Baskes, M. I., Horstemeyer, M., & Prabhu, R. (2018). Quantifying Strain State Effect on Neuronal Membrane Damage. 18th U.S. National Congress for Theoretical and Applied Mechanics. Rosemont, IL. [Abstract]
Murphy, M. A., Prabhu, R., Williams, L. N., & Horstemeyer, M. (2017). Loading Rate Effect on The Ratio of Yield to Failure Stress for A Simplified Membrane. International Mechanical Engineering Congress & Exposition. Tampa, FL: American Society of Mechanical Engineers. [Abstract]
Bakhtiarydavijani, A., Prabhu, R., Horstemeyer, M., Murphy, M. A., Mun, S., LaPlaca, M. C., & Jones, M. D. (2017). Mechano-physiological Damage Modeling of Neuronal Death Due to Traumatic Brain Injury. International Mechanical Engineering Congress & Exposition. Tampa, FL: American Society of Mechanical Engineers. [Abstract]
Thesis and Dissertation
Murphy, M. A. (2017). Using Molecular Dynamics to Quantify Biaxial Membrane Damage in a Multiscale Modeling Framework for Traumatic Brain Injury. Mississippi State University: ProQuest Dissertations and Theses. [Abstract]